Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ribosomal large subunit pseudouridine synthase e | L286_00430 | Not Available | Positive | 85255 - 85794 | 20387.7 |
| hypothetical protein | L286_00435 | Not Available | Positive | 85828 - 86061 | 8234.86 |
| hypothetical protein | L286_00440 | Not Available | Positive | 86093 - 86440 | 12615.1 |
| mucr family transcriptional regulator | L286_00445 | Not Available | Positive | 86527 - 87297 | 26170.0 |
| hypothetical protein | L286_00450 | Not Available | Negative | 87364 - 88116 | 28136.6 |
| transposase | L286_00455 | Not Available | Positive | 88397 - 88642 | 8907.57 |
| transposase is6501 | L286_00460 | Not Available | Positive | 88651 - 89031 | 13951.1 |
| hypothetical protein | L286_00465 | Not Available | Positive | 89685 - 90011 | 12553.8 |
| atpase | L286_00470 | Not Available | Positive | 90011 - 90748 | 26640.0 |
| hypothetical protein | L286_00475 | Not Available | Positive | 90748 - 92878 | 79100.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
