Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | L286_13465 | Not Available | Positive | 2628242 - 2629165 | 33840.0 |
| monooxygenase | L286_13470 | Not Available | Negative | 2629126 - 2629629 | 17631.2 |
| hypothetical protein | L286_13475 | Not Available | Negative | 2629768 - 2630103 | 12387.7 |
| linc sdr-family protein | L286_13480 | Not Available | Negative | 2630185 - 2630943 | 25598.9 |
| tonb-denpendent receptor | L286_13485 | Not Available | Negative | 2630940 - 2633315 | 85768.5 |
| dioxygenase | L286_13490 | Not Available | Positive | 2633583 - 2634812 | 45865.6 |
| hypothetical protein | L286_13495 | Not Available | Positive | 2634823 - 2635185 | 13775.4 |
| oxidoreductase | L286_13500 | Not Available | Negative | 2635225 - 2636145 | 31831.1 |
| tetr family transcriptional regulator | L286_13505 | Not Available | Negative | 2636333 - 2636944 | 21988.4 |
| bphc dioxygenase | L286_13510 | Not Available | Positive | 2637320 - 2637958 | 24142.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
