Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-denpendent receptor | L286_00380 | Not Available | Positive | 74811 - 76937 | 76710.0 |
| peptidase | L286_00385 | Not Available | Positive | 76937 - 78019 | 39831.0 |
| metallophosphoesterase | L286_00390 | Not Available | Negative | 77998 - 78741 | 26628.6 |
| hypothetical protein | L286_00395 | Not Available | Negative | 78725 - 79498 | 29885.7 |
| methylmalonate-semialdehyde dehydrogenase | L286_00400 | Not Available | Negative | 79553 - 81052 | 53649.4 |
| lysr family transcriptional regulator | L286_00405 | Not Available | Positive | 81153 - 82037 | 32432.4 |
| methyltransferase | L286_00410 | Not Available | Positive | 82196 - 82807 | 22418.1 |
| spermidine synthase | L286_00415 | Not Available | Negative | 82870 - 83514 | 22733.4 |
| hypothetical protein | L286_00420 | Not Available | Positive | 83585 - 84037 | 16828.1 |
| cupin | L286_00425 | Not Available | Positive | 84103 - 85248 | 42428.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
