Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylmuramoylalanine--d-glutamate ligase | L286_12560 | Not Available | Negative | 2434123 - 2435511 | 48423.4 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | L286_12565 | Not Available | Negative | 2435517 - 2436566 | 37464.8 |
| udp-n-acetylmuramoylalanyl-d-glutamyl-2, 6-diaminopimelate--d-alanyl-d-alanine ligase | L286_12570 | Not Available | Negative | 2436590 - 2437966 | 47501.9 |
| udp-n-acetylmuramoylalanyl-d-glutamate--2, 6-diaminopimelate ligase | L286_12575 | Not Available | Negative | 2438076 - 2439518 | 50366.0 |
| peptidoglycan glycosyltransferase | L286_12580 | Not Available | Negative | 2439518 - 2441218 | 61243.2 |
| hypothetical protein | L286_12585 | Not Available | Negative | 2441219 - 2441872 | 23691.6 |
| 16s rrna methyltransferase | L286_12590 | Not Available | Negative | 2441869 - 2442801 | 33794.1 |
| mraz protein | L286_12595 | Not Available | Negative | 2442846 - 2443343 | 18764.2 |
| hypothetical protein | L286_12600 | Not Available | Negative | 2443529 - 2444869 | 47852.1 |
| hypothetical protein | L286_12605 | Not Available | Negative | 2444912 - 2445187 | 9580.78 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
