Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l13 | L286_12260 | Not Available | Negative | 2376864 - 2377343 | 17665.7 |
| heme a synthase | L286_12265 | Not Available | Negative | 2377492 - 2378598 | 40251.1 |
| histidine kinase | L286_12270 | Not Available | Positive | 2378658 - 2380721 | 75286.1 |
| 2-dehydro-3-deoxy-6-phosphogalactonate aldolase | L286_12275 | Not Available | Negative | 2381019 - 2381648 | 21464.2 |
| 2-dehydro-3-deoxygalactonokinase | L286_12280 | Not Available | Negative | 2381645 - 2382577 | 32747.0 |
| dihydroxy-acid dehydratase | L286_12285 | Not Available | Positive | 2382691 - 2384493 | 64227.0 |
| 2,5-dioxovalerate dehydrogenase | L286_12290 | Not Available | Positive | 2384516 - 2386093 | 54108.8 |
| gguc protein | L286_12295 | Not Available | Positive | 2386114 - 2387091 | 34689.1 |
| galactose 1-dehydrogenase | L286_12300 | Not Available | Positive | 2387088 - 2388011 | 32998.4 |
| gntr family transcriptional regulator | L286_12305 | Not Available | Positive | 2388029 - 2388784 | 27798.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
