Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 50s ribosomal protein l23 | L286_12210 | Not Available | Negative | 2367544 - 2367861 | 11451.8 |
| 50s ribosomal protein l4 | L286_12215 | Not Available | Negative | 2367854 - 2368489 | 22410.1 |
| 50s ribosomal protein l3 | L286_12220 | Not Available | Negative | 2368492 - 2369247 | 26758.0 |
| 30s ribosomal protein s10 | L286_12225 | Not Available | Negative | 2369564 - 2369872 | 11535.1 |
| elongation factor tu | L286_12230 | Not Available | Negative | 2370081 - 2371271 | 42816.4 |
| elongation factor g | L286_12235 | Not Available | Negative | 2371408 - 2373480 | 76480.0 |
| 30s ribosomal protein s7 | L286_12240 | Not Available | Negative | 2373655 - 2374125 | 17618.2 |
| 30s ribosomal protein s12 | L286_12245 | Not Available | Negative | 2374141 - 2374524 | 14412.8 |
| peptidase m23 | L286_12250 | Not Available | Positive | 2375015 - 2376205 | 41828.9 |
| 30s ribosomal protein s9 | L286_12255 | Not Available | Negative | 2376337 - 2376864 | 18658.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
