Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| orotate phosphoribosyltransferase | L286_12010 | Not Available | Positive | 2340378 - 2340959 | 20802.2 |
| pyridoxine 5'-phosphate synthase | L286_12015 | Not Available | Positive | 2340963 - 2341700 | 26178.6 |
| 4'-phosphopantetheinyl transferase | L286_12020 | Not Available | Positive | 2341697 - 2342098 | 14425.5 |
| signal peptidase i | L286_12025 | Not Available | Positive | 2342130 - 2343023 | 32598.0 |
| permease | L286_12030 | Not Available | Positive | 2343047 - 2344144 | 38891.3 |
| peptidylprolyl isomerase | L286_12035 | Not Available | Negative | 2344257 - 2344817 | 19323.3 |
| 30s ribosomal protein s21 | L286_12040 | Not Available | Negative | 2344900 - 2345106 | 8257.16 |
| hypothetical protein | L286_12045 | Not Available | Negative | 2345231 - 2345371 | 4993.32 |
| aldolase | L286_12050 | Not Available | Positive | 2345370 - 2346101 | 26948.3 |
| histidine kinase | L286_12055 | Not Available | Positive | 2346258 - 2348129 | 68434.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
