Sphingobium sp. HDIP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. HDIP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. HDIP04 contig143, whole genome shotgun sequence.

Gene Summary

Adenine Count

835843 bp

Thymine Count

834978 bp

Guanine Count

1535055 bp

Cytosine Count

1535695 bp

Genome Length

4741576 bp

Protein-coding Genes

4548 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinL286_10775Not AvailableNegative2129989 - 21301747335.02
carbon starvation protein aL286_10780Not AvailableNegative2130171 - 213218370234.6
2'-5' rna ligaseL286_10785Not AvailablePositive2132386 - 213296721413.9
phna proteinL286_10790Not AvailableNegative2132973 - 213327510812.8
gtp-binding protein ysxcL286_10795Not AvailableNegative2133279 - 213390222830.7
membrane protein insertase yidcL286_10800Not AvailableNegative2133937 - 213564062701.4
membrane protein insertion efficiency factorL286_10805Not AvailableNegative2135666 - 21358787721.54
ribonuclease pL286_10810Not AvailableNegative2135875 - 213628514930.4
50s ribosomal protein l34L286_10815Not AvailableNegative2136318 - 21364525122.37
permeaseL286_10820Not AvailablePositive2136795 - 213770032003.2

Displaying genes 2221 – 2230 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.