Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pseudouridine synthase | L286_00140 | Not Available | Positive | 23296 - 24064 | 28113.9 |
| methyltransferase | L286_00145 | Not Available | Positive | 24061 - 24609 | 19408.3 |
| hypothetical protein | L286_00150 | Not Available | Negative | 24699 - 24969 | 9046.6 |
| membrane protein | L286_00155 | Not Available | Negative | 25101 - 26072 | 33922.3 |
| cytochrome c550 | L286_00160 | Not Available | Positive | 26213 - 26638 | 15049.7 |
| abc transporter substrate-binding protein | L286_00165 | Not Available | Positive | 26643 - 27497 | 30014.0 |
| dehydrogenase | L286_00170 | Not Available | Positive | 27626 - 29368 | 62254.6 |
| transcriptional regulator | L286_00175 | Not Available | Positive | 29502 - 30158 | 23853.2 |
| gcn5 family n-acetyltransferase | L286_00180 | Not Available | Positive | 30278 - 30823 | 18792.4 |
| ybak/prolyl-trna synthetase associated domain-containing protein | L286_00185 | Not Available | Positive | 30987 - 31463 | 17662.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
