Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 25 | L286_10115 | Not Available | Positive | 1988592 - 1989257 | 23978.5 |
| cytidine deaminase | L286_10120 | Not Available | Positive | 1989254 - 1989712 | 15593.7 |
| deoxycytidine triphosphate deaminase | L286_10125 | Not Available | Positive | 1989719 - 1990273 | 20552.4 |
| metallophosphoesterase | L286_10130 | Not Available | Positive | 1990317 - 1991081 | 28419.2 |
| tonb-denpendent receptor | L286_10135 | Not Available | Positive | 1991101 - 1994055 | 105023.0 |
| hypothetical protein | L286_10140 | Not Available | Positive | 1994182 - 1994505 | 11510.8 |
| riboflavin synthase subunit alpha | L286_10145 | Not Available | Positive | 1994559 - 1995173 | 21192.4 |
| 3,4-dihydroxy-2-butanone 4-phosphate synthase | L286_10150 | Not Available | Positive | 1995244 - 1996527 | 46288.4 |
| 6,7-dimethyl-8-ribityllumazine synthase | L286_10155 | Not Available | Positive | 1996540 - 1996962 | 14920.0 |
| nadh:flavin oxidoreductase | L286_10160 | Not Available | Negative | 1997016 - 1998098 | 38800.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
