Sphingobium sp. HDIP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. HDIP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. HDIP04 contig143, whole genome shotgun sequence.

Gene Summary

Adenine Count

835843 bp

Thymine Count

834978 bp

Guanine Count

1535055 bp

Cytosine Count

1535695 bp

Genome Length

4741576 bp

Protein-coding Genes

4548 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
succinylglutamate-semialdehyde dehydrogenaseL286_10065Not AvailablePositive1979879 - 198131250779.7
cysgL286_10070Not AvailablePositive1981423 - 198221126956.8
hypothetical proteinL286_10075Not AvailablePositive1982208 - 198250410481.3
sulfite reductaseL286_10080Not AvailablePositive1982508 - 198413960869.5
hypothetical proteinL286_10085Not AvailablePositive1984132 - 198457216278.0
phosphoadenosine phosphosulfate reductaseL286_10090Not AvailablePositive1984565 - 198535629039.3
hypothetical proteinL286_10095Not AvailablePositive1985441 - 198586915929.9
membrane proteinL286_10100Not AvailablePositive1985988 - 198638314097.8
dna helicaseL286_10105Not AvailableNegative1986461 - 198798755937.8
hypothetical proteinL286_10110Not AvailablePositive1988077 - 198855918602.3

Displaying genes 2081 – 2090 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.