Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s6 | L286_10015 | Not Available | Positive | 1971717 - 1972193 | 17721.1 |
| 30s ribosomal protein s18 | L286_10020 | Not Available | Positive | 1972207 - 1972431 | 8494.64 |
| 50s ribosomal protein l9 | L286_10025 | Not Available | Positive | 1972445 - 1973041 | 21349.3 |
| cytochrome c | L286_10030 | Not Available | Positive | 1973312 - 1973686 | 12590.5 |
| hypothetical protein | L286_10035 | Not Available | Negative | 1974331 - 1974429 | 3739.76 |
| hypothetical protein | L286_10040 | Not Available | Negative | 1974634 - 1974846 | 7942.31 |
| 2-nitropropane dioxygenase | L286_10045 | Not Available | Negative | 1974846 - 1976291 | 52936.8 |
| glycosyl transferase family 1 | L286_10050 | Not Available | Negative | 1976345 - 1977496 | 41598.2 |
| alpha/beta hydrolase | L286_10055 | Not Available | Negative | 1977512 - 1978381 | 31498.0 |
| hypothetical protein | L286_10060 | Not Available | Positive | 1978422 - 1979816 | 51251.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
