Sphingobium sp. HDIP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. HDIP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. HDIP04 contig143, whole genome shotgun sequence.

Gene Summary

Adenine Count

835843 bp

Thymine Count

834978 bp

Guanine Count

1535055 bp

Cytosine Count

1535695 bp

Genome Length

4741576 bp

Protein-coding Genes

4548 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s15L286_09865Not AvailableNegative1941482 - 194175110146.3
trna pseudouridine synthase bL286_09870Not AvailableNegative1941771 - 194269132248.4
thymidine kinaseL286_09875Not AvailableNegative1942761 - 194334221564.8
alpha/beta hydrolaseL286_09880Not AvailableNegative1943342 - 194423531377.3
ribosome-binding factor aL286_09885Not AvailableNegative1944404 - 194480815107.2
translation initiation factor if-2L286_09890Not AvailableNegative1944845 - 194743393155.0
transcription terminating nucleic-acid-binding proteinL286_09895Not AvailableNegative1947504 - 194816022823.7
isomeraseL286_09900Not AvailableNegative1948359 - 19485927960.43
transcription elongation factor nusaL286_09905Not AvailableNegative1948599 - 195017058171.2
ribosome maturation factor rimpL286_09910Not AvailableNegative1950184 - 195070818812.3

Displaying genes 2041 – 2050 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Health Effects

No health effects information available for this bacterium.