Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna-binding protein hfq | L286_09295 | Not Available | Positive | 1844798 - 1845292 | 18222.4 |
| gtpase hflx | L286_09300 | Not Available | Positive | 1845391 - 1846689 | 47190.3 |
| nucleotide pyrophosphohydrolase | L286_09305 | Not Available | Negative | 1846732 - 1847523 | 29306.7 |
| mfs transporter | L286_09310 | Not Available | Negative | 1847654 - 1848949 | 46964.9 |
| aspartyl protease | L286_09315 | Not Available | Negative | 1848946 - 1849581 | 22274.2 |
| beta-lactamase | L286_09320 | Not Available | Negative | 1849598 - 1850377 | 28711.0 |
| luxr family transcriptional regulator | L286_09325 | Not Available | Negative | 1850374 - 1851147 | 28410.5 |
| methionyl-trna synthetase | L286_09330 | Not Available | Negative | 1851149 - 1852711 | 58366.1 |
| dna-directed dna polymerase | L286_09335 | Not Available | Negative | 1852755 - 1853717 | 34253.3 |
| thymidylate kinase | L286_09340 | Not Available | Negative | 1853714 - 1854355 | 22607.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
