Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | L286_09095 | Not Available | Negative | 1801274 - 1801987 | 26735.4 |
| xre family transcriptional regulator | L286_09100 | Not Available | Negative | 1802073 - 1803488 | 52334.8 |
| methylmalonyl-coa carboxyltransferase | L286_09105 | Not Available | Positive | 1803609 - 1805141 | 55508.7 |
| methylmalonyl-coa epimerase | L286_09110 | Not Available | Positive | 1805252 - 1805689 | 15705.9 |
| methylmalonyl-coa mutase | L286_09115 | Not Available | Positive | 1805838 - 1808003 | 78127.4 |
| biotin synthase | L286_09120 | Not Available | Positive | 1808120 - 1809106 | 35511.8 |
| acetyl-coa carboxylase | L286_09125 | Not Available | Positive | 1809269 - 1811254 | 72001.7 |
| pp_01753 | L286_09130 | Not Available | Positive | 1811328 - 1811699 | Not Available |
| major facilitator transporter | L286_09135 | Not Available | Positive | 1811965 - 1813554 | 56498.6 |
| alanine racemase | L286_09140 | Not Available | Positive | 1813629 - 1814642 | 36335.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
