Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| deor family transcriptional regulator | L286_08945 | Not Available | Negative | 1762310 - 1764118 | 67032.3 |
| dna polymerase iii subunit alpha | L286_08950 | Not Available | Positive | 1764246 - 1767782 | 128692.0 |
| radical sam protein | L286_08955 | Not Available | Negative | 1767881 - 1768948 | 39939.1 |
| hypothetical protein | L286_08960 | Not Available | Positive | 1769030 - 1769539 | 18276.6 |
| molybdopterin biosynthesis protein b | L286_08965 | Not Available | Negative | 1769562 - 1770089 | 19119.7 |
| lytic transglycosylase | L286_08970 | Not Available | Negative | 1770089 - 1771852 | 63077.2 |
| uracil-dna glycosylase | L286_08975 | Not Available | Negative | 1771888 - 1772592 | 25172.5 |
| electron transfer flavoprotein-ubiquinone oxidoreductase | L286_08980 | Not Available | Positive | 1772732 - 1774384 | 60580.3 |
| hypothetical protein | L286_08985 | Not Available | Positive | 1774416 - 1776038 | 57146.1 |
| 4-diphosphocytidyl-2c-methyl-d-erythritol kinase | L286_08990 | Not Available | Positive | 1776025 - 1776924 | 31463.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
