Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidoglycan transglycosylase | L286_08495 | Not Available | Negative | 1666038 - 1666736 | 25618.4 |
| rna polymerase sigma 70 | L286_08500 | Not Available | Negative | 1666887 - 1667801 | 34670.6 |
| ribosomal large subunit pseudouridine synthase d | L286_08505 | Not Available | Negative | 1667877 - 1668839 | 34374.7 |
| peptidase | L286_08510 | Not Available | Positive | 1668857 - 1669258 | 13855.7 |
| histidine phosphotransferase | L286_08515 | Not Available | Positive | 1669340 - 1669993 | 22854.8 |
| 2-nitropropane dioxygenase | L286_08520 | Not Available | Negative | 1669990 - 1671042 | 35775.9 |
| glutamine synthetase | L286_08525 | Not Available | Negative | 1671206 - 1672588 | 51186.9 |
| nitrogen regulatory protein p-ii 1 | L286_08530 | Not Available | Negative | 1672732 - 1673070 | 12196.7 |
| methionine aminopeptidase | L286_08535 | Not Available | Negative | 1673312 - 1674142 | 29926.1 |
| molybdopterin-binding protein | L286_08540 | Not Available | Positive | 1674223 - 1674984 | 26689.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
