Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-n-arabinofuranosidase | L286_07465 | Not Available | Negative | 1442855 - 1443985 | 41811.1 |
| tryptophan halogenase | L286_07470 | Not Available | Negative | 1444098 - 1445657 | 57943.1 |
| tonb-denpendent receptor | L286_07475 | Not Available | Negative | 1445705 - 1448611 | 104948.0 |
| sapc-like protein | L286_07480 | Not Available | Positive | 1448902 - 1449597 | 25068.0 |
| transcription factor jumonji jmjc domain-containing protein | L286_07485 | Not Available | Positive | 1449600 - 1450619 | 36083.5 |
| 9-o-acetylesterase | L286_07490 | Not Available | Positive | 1450782 - 1452737 | 68900.7 |
| alpha-galactosidase | L286_07495 | Not Available | Negative | 1452752 - 1454647 | 68930.0 |
| alpha/beta hydrolase | L286_07500 | Not Available | Negative | 1454644 - 1456977 | 84139.1 |
| glycosyl hydrolase | L286_07505 | Not Available | Negative | 1456974 - 1458533 | 57157.5 |
| xylan 1,4-beta-xylosidase | L286_07510 | Not Available | Negative | 1458545 - 1460269 | 63240.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
