Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Dna packaging/head-tail-connector | L286_11710 | Not Available | Negative | 2291067 - 2291594 | 19540.3 |
| hypothetical protein | L286_11715 | Not Available | Negative | 2291627 - 2291914 | 10188.9 |
| Major capsid protein | L286_11720 | Not Available | Negative | 2291994 - 2293292 | 46448.3 |
| Putative prohead protease | L286_11725 | Not Available | Negative | 2293303 - 2293998 | 25055.8 |
| Portal-like protein | L286_11730 | Not Available | Negative | 2293992 - 2295287 | 47341.9 |
| Terminase large subunit | L286_11735 | Not Available | Negative | 2295284 - 2297047 | 66040.0 |
| hypothetical protein | L286_11740 | Not Available | Negative | 2297088 - 2297513 | 15341.6 |
| Homing endonuclease gp49 | L286_11745 | Not Available | Negative | 2297654 - 2297971 | 11706.0 |
| Attr | Not Available | Not Available | Positive | 2310740 - 2310751 | Not Available |
| Isrso12-transposase orfb protein | L286_19705 | Not Available | Positive | 3935349 - 3936101 | 29283.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
