Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| flp pilus assembly protein atpase cpae | L286_05715 | Not Available | Positive | 1103265 - 1104551 | 45768.9 |
| tight adherence protein b | L286_05720 | Not Available | Positive | 1104623 - 1105621 | 36456.7 |
| type ii secretion system protein | L286_05725 | Not Available | Positive | 1105635 - 1106627 | 36026.8 |
| hypothetical protein | L286_05730 | Not Available | Positive | 1106763 - 1107194 | 15151.6 |
| peptide deformylase | L286_05735 | Not Available | Negative | 1107394 - 1107924 | 19740.9 |
| recombinase recr | L286_05740 | Not Available | Negative | 1107973 - 1108569 | 21387.9 |
| methionyl-trna formyltransferase | L286_05745 | Not Available | Positive | 1108772 - 1109665 | 31277.7 |
| trna pseudouridine synthase a | L286_05750 | Not Available | Positive | 1109670 - 1110416 | 27517.0 |
| membrane protein | L286_05755 | Not Available | Negative | 1110444 - 1111208 | 27947.3 |
| Trna-arg | Not Available | Not Available | Positive | 1111377 - 1111453 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
