Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| peptidase m48, ste24p | L286_05460 | Not Available | Negative | 1050367 - 1051779 | 49540.7 |
| acetyl-coa carboxylase subunit alpha | L286_05465 | Not Available | Negative | 1051924 - 1052868 | 33519.1 |
| tyrosine recombinase xerd | L286_05470 | Not Available | Negative | 1052880 - 1053797 | 32811.7 |
| hypothetical protein | L286_05480 | Not Available | Negative | 1054001 - 1055606 | 56623.1 |
| hypothetical protein | L286_05485 | Not Available | Negative | 1055612 - 1055800 | 6844.54 |
| shikimate kinase | L286_05490 | Not Available | Positive | 1055881 - 1056429 | 20029.2 |
| 3-dehydroquinate synthase | L286_05495 | Not Available | Positive | 1056420 - 1057529 | 39108.0 |
| 50s ribosomal protein l31 | L286_05500 | Not Available | Negative | 1057763 - 1057987 | 8307.79 |
| 3-hydroxyacyl-acp dehydratase | L286_05505 | Not Available | Negative | 1058166 - 1058645 | 17016.1 |
| membrane protein | L286_05510 | Not Available | Negative | 1058653 - 1059312 | 22518.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
