Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetyl-coa carboxylase subunit beta | L286_05410 | Not Available | Negative | 1042149 - 1043750 | 57459.8 |
| transmembrane signal peptide protein | L286_05415 | Not Available | Positive | 1043796 - 1044134 | 12291.5 |
| isovaleryl-coa dehydrogenase | L286_05420 | Not Available | Negative | 1044241 - 1045386 | 41162.6 |
| lysr family transcriptional regulator | L286_05425 | Not Available | Positive | 1045473 - 1046348 | 31677.5 |
| sam-dependent methyltransferase | L286_05430 | Not Available | Negative | 1046302 - 1047126 | 29213.1 |
| membrane protein | L286_05435 | Not Available | Positive | 1047177 - 1048421 | 45787.7 |
| bacterioferritin | L286_05440 | Not Available | Positive | 1048796 - 1049275 | 18718.4 |
| ntp pyrophosphohydrolase | L286_05445 | Not Available | Negative | 1049326 - 1049709 | 13946.1 |
| pilus assembly protein | L286_05450 | Not Available | Positive | 1049800 - 1049997 | 7078.88 |
| flp/fap pilin protein | L286_05455 | Not Available | Positive | 1050136 - 1050297 | 5529.95 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
