Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| extensin | L286_05305 | Not Available | Negative | 1021851 - 1022576 | 26294.7 |
| nudix hydrolase | L286_05310 | Not Available | Negative | 1022580 - 1023350 | 27363.7 |
| aldehyde dehydrogenase | L286_05315 | Not Available | Negative | 1023447 - 1024889 | 52153.9 |
| apramycin biosynthesis protein | L286_05320 | Not Available | Negative | 1024932 - 1025903 | 35900.6 |
| choline dehydrogenase | L286_05325 | Not Available | Negative | 1025944 - 1027572 | 58878.6 |
| iclr family transcriptional regulator | L286_05335 | Not Available | Positive | 1027848 - 1028675 | 29738.5 |
| mfs transporter | L286_05340 | Not Available | Negative | 1028721 - 1030025 | 46629.0 |
| ser/thr protein phosphatase | L286_05345 | Not Available | Negative | 1030186 - 1031511 | 49740.4 |
| tonb-denpendent receptor | L286_05350 | Not Available | Negative | 1031592 - 1033850 | 81385.6 |
| thioesterase | L286_05355 | Not Available | Negative | 1034318 - 1034755 | 16091.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
