Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. HDIP04 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
835843 bp
Thymine Count
834978 bp
Guanine Count
1535055 bp
Cytosine Count
1535695 bp
Genome Length
4741576 bp
Protein-coding Genes
4548 genes
Non-Coding Genes
168 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-deoxy-d-xylulose-5-phosphate synthase | L286_04850 | Not Available | Positive | 934654 - 936588 | 68696.4 |
| vanillate o-demethylase oxidoreductase vanb | L286_04855 | Not Available | Positive | 936624 - 937109 | 18241.5 |
| arsr family transcriptional regulator | L286_04860 | Not Available | Positive | 937096 - 937425 | 11691.1 |
| hypothetical protein | L286_04865 | Not Available | Negative | 937442 - 937816 | 12103.1 |
| peptidase a8 | L286_04870 | Not Available | Negative | 937852 - 938367 | 19206.0 |
| isoleucyl-trna synthase | L286_04875 | Not Available | Negative | 938486 - 941392 | 108260.0 |
| riboflavin biosynthesis protein ribf | L286_04880 | Not Available | Negative | 941518 - 942456 | 33963.9 |
| dihydrofolate reductase | L286_04885 | Not Available | Negative | 942465 - 942989 | 18845.6 |
| phosphoribosylaminoimidazole carboxylase | L286_04890 | Not Available | Negative | 943122 - 944132 | 36097.6 |
| n5-carboxyaminoimidazole ribonucleotide mutase | L286_04895 | Not Available | Negative | 944194 - 944688 | 16900.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
