Sphingobium sp. HDIP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. HDIP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. HDIP04 contig143, whole genome shotgun sequence.

Gene Summary

Adenine Count

835843 bp

Thymine Count

834978 bp

Guanine Count

1535055 bp

Cytosine Count

1535695 bp

Genome Length

4741576 bp

Protein-coding Genes

4548 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinL286_04740Not AvailableNegative915848 - 9160366839.46
hypothetical proteinL286_04745Not AvailableNegative916033 - 91822875790.5
dna repair protein radcL286_04755Not AvailablePositive919257 - 91995225477.1
Trna-glyNot AvailableNot AvailablePositive920225 - 920298Not Available
2-dehydro-3-deoxygluconokinaseL286_04770Not AvailableNegative920360 - 92129232551.5
pas sensor proteinL286_04775Not AvailablePositive921427 - 92304357605.3
hypothetical proteinL286_04780Not AvailableNegative923293 - 92365213341.2
serine o-acetyltransferaseL286_04785Not AvailableNegative923652 - 92436225859.3
membrane proteinL286_04790Not AvailablePositive924523 - 92529627107.5
lysr family transcriptional regulatorL286_04795Not AvailablePositive925336 - 92626234410.0

Displaying genes 1071 – 1080 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.