Sphingobium sp. HDIP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. HDIP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. HDIP04 contig143, whole genome shotgun sequence.

Gene Summary

Adenine Count

835843 bp

Thymine Count

834978 bp

Guanine Count

1535055 bp

Cytosine Count

1535695 bp

Genome Length

4741576 bp

Protein-coding Genes

4548 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinL286_04640Not AvailableNegative894640 - 89545229117.6
pilus assembly protein taddL286_04645Not AvailableNegative895449 - 89622526930.3
secretion system proteinL286_04650Not AvailableNegative896245 - 89721335532.4
secretion system proteinL286_04655Not AvailableNegative897218 - 89821936578.1
cpaf pilus assembly protein, atpase cpafL286_04660Not AvailableNegative898219 - 89957449733.4
pilus biosynthesis protein cpaeL286_04665Not AvailableNegative899574 - 90082444611.9
hypothetical proteinL286_04670Not AvailableNegative903581 - 9038539279.98
flp pilus assembly protein secretin cpacL286_04675Not AvailableNegative903868 - 90534951193.9
flp pilus assembly protein cpabL286_04680Not AvailableNegative905360 - 90624730829.2
hypothetical proteinL286_04685Not AvailableNegative906357 - 9065365710.76

Displaying genes 1051 – 1060 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.