Sphingobium sp. HDIP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. HDIP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. HDIP04 contig143, whole genome shotgun sequence.

Gene Summary

Adenine Count

835843 bp

Thymine Count

834978 bp

Guanine Count

1535055 bp

Cytosine Count

1535695 bp

Genome Length

4741576 bp

Protein-coding Genes

4548 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
hypothetical proteinL286_04540Not AvailablePositive864904 - 86526312740.4
organic hydroperoxide resistance proteinL286_04545Not AvailableNegative865344 - 86576914506.1
marr family transcriptional regulatorL286_04550Not AvailablePositive865904 - 86634115975.4
dna topoisomerase iv subunit bL286_04555Not AvailablePositive866403 - 86837972666.2
transglutaminaseL286_04560Not AvailablePositive868596 - 86965437337.0
type i secretion protein hlydL286_04565Not AvailableNegative869950 - 87122445828.9
slebL286_04570Not AvailableNegative871221 - 87219835000.6
atp-binding proteinL286_04575Not AvailableNegative872309 - 87446878806.6
agglutination proteinL286_04580Not AvailableNegative874522 - 87590751009.0
cell envelope biogenesis protein ompaL286_04585Not AvailableNegative875929 - 87663324368.7

Displaying genes 1031 – 1040 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.