Sphingobium sp. HDIP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. HDIP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. HDIP04 contig143, whole genome shotgun sequence.

Gene Summary

Adenine Count

835843 bp

Thymine Count

834978 bp

Guanine Count

1535055 bp

Cytosine Count

1535695 bp

Genome Length

4741576 bp

Protein-coding Genes

4548 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
30s ribosomal protein s11L286_04485Not AvailableNegative855011 - 85540013964.7
30s ribosomal protein s13L286_04490Not AvailableNegative855504 - 85587213644.8
protein tyrosine kinaseL286_04500Not AvailableNegative856479 - 85857274720.0
polysaccharide export proteinL286_04505Not AvailableNegative858572 - 85928224415.8
udp-n-acetyl-d-mannosamine dehydrogenaseL286_04510Not AvailableNegative859393 - 86070347366.1
udp-n-acetylglucosamine 2-epimeraseL286_04515Not AvailableNegative860821 - 86196340664.0
udp-glucose 6-dehydrogenaseL286_04520Not AvailablePositive862121 - 86344046197.7
hypothetical proteinL286_04525Not AvailablePositive863440 - 8635654398.71
multidrug abc transporter permeaseL286_04530Not AvailableNegative863709 - 86449128129.4
hypothetical proteinL286_04535Not AvailablePositive864676 - 8649038211.85

Displaying genes 1021 – 1030 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.