Sphingobium sp. HDIP04

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. HDIP04
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Sphingobium sp. HDIP04 contig143, whole genome shotgun sequence.

Gene Summary

Adenine Count

835843 bp

Thymine Count

834978 bp

Guanine Count

1535055 bp

Cytosine Count

1535695 bp

Genome Length

4741576 bp

Protein-coding Genes

4548 genes

Non-Coding Genes

168 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
transcriptional regulatorL286_04435Not AvailablePositive843633 - 84390210453.6
integraseL286_04440Not AvailableNegative843892 - 84514847762.8
gmp synthaseL286_04445Not AvailableNegative845467 - 84702656785.3
membrane proteinL286_04450Not AvailableNegative847069 - 84772822177.9
membrane proteinL286_04455Not AvailableNegative847747 - 84946262346.4
hypothetical proteinL286_04460Not AvailableNegative849472 - 85007121095.1
hypothetical proteinL286_04465Not AvailableNegative850164 - 85069419134.5
prolyl endopeptidaseL286_04470Not AvailableNegative850765 - 85295180033.8
50s ribosomal protein l17L286_04475Not AvailableNegative853188 - 85361315610.8
dna-directed rna polymerase subunit alphaL286_04480Not AvailableNegative853825 - 85488938300.0

Displaying genes 1011 – 1020 of 4716 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
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Result columns

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
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Health Effects

No health effects information available for this bacterium.