Thiohalomonas denitrificans

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiohalomonadales

Family

Thiohalomonadaceae

Genus

Thiohalomonas

Description

Thiohalomonas denitrificans is a Gram-negative, rod-shaped bacterium that thrives in anaerobic environments. This microbe is characterized by its ability to perform denitrification, a crucial biochemical process that reduces nitrate to nitrogen gas, thereby playing a significant role in the nitrogen cycle. The anaerobic nature of T. denitrificans suggests a specialization for environments devoid of oxygen, where it contributes to the reduction of nitrogen compounds, potentially influencing local nutrient dynamics. The rod shape of T. denitrificans allows for efficient motility and nutrient acquisition in its natural habitat, which may include marine sediments or other anoxic environments. Its metabolic capabilities enable it to utilize various electron donors, thereby enhancing its adaptability to fluctuating environmental conditions. The ecological role of Thiohalomonas denitrificans extends beyond nitrogen cycling; it may also interact with other microbial communities, influencing community structure and function. Understanding its specific metabolic pathways and interactions can provide insights into biogeochemical processes in anaerobic ecosystems. Furthermore, the study of T. denitrificans could reveal important information regarding microbial adaptations to extreme environments, shedding light on the resilience and versatility of life in low-oxygen habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiohalomonadales
FamilyThiohalomonadaceae
GenusThiohalomonas
SpeciesThiohalomonas denitrificans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsaline soil; SS2
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiohalomonas denitrificans strain HLD2 genome assembly, contig:

Gene Summary

Adenine Count

722589 bp

Thymine Count

704579 bp

Guanine Count

1050732 bp

Cytosine Count

1083916 bp

Genome Length

3563632 bp

Protein-coding Genes

3248 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh dehydrogenaseSAMN03097708_00758Not AvailablePositive799386 - 80035135965.2
trna nucleotidyltransferase (cca-adding enzyme)SAMN03097708_00759Not AvailablePositive800454 - 80167446077.9
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN03097708_00760Not AvailableNegative801859 - 80284236646.5
pas domain s-box-containing proteinSAMN03097708_00761Not AvailableNegative802839 - 80409846289.3
circadian clock protein kaibSAMN03097708_00762Not AvailableNegative804095 - 80441511743.1
circadian clock protein kaicSAMN03097708_00763Not AvailableNegative804418 - 80623266781.3
histidine kinase-, dna gyrase b-, and hsp90-like atpaseSAMN03097708_00764Not AvailablePositive806690 - 8068425624.85
hypothetical proteinSAMN03097708_00765Not AvailableNegative807102 - 80785128718.1
vanz like family proteinSAMN03097708_00766Not AvailableNegative807890 - 80827314017.4
undecaprenyl-diphosphataseSAMN03097708_00767Not AvailableNegative808266 - 80906328332.4

Displaying genes 781 – 790 of 3319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.