Thiohalomonas denitrificans

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiohalomonadales

Family

Thiohalomonadaceae

Genus

Thiohalomonas

Description

Thiohalomonas denitrificans is a Gram-negative, rod-shaped bacterium that thrives in anaerobic environments. This microbe is characterized by its ability to perform denitrification, a crucial biochemical process that reduces nitrate to nitrogen gas, thereby playing a significant role in the nitrogen cycle. The anaerobic nature of T. denitrificans suggests a specialization for environments devoid of oxygen, where it contributes to the reduction of nitrogen compounds, potentially influencing local nutrient dynamics. The rod shape of T. denitrificans allows for efficient motility and nutrient acquisition in its natural habitat, which may include marine sediments or other anoxic environments. Its metabolic capabilities enable it to utilize various electron donors, thereby enhancing its adaptability to fluctuating environmental conditions. The ecological role of Thiohalomonas denitrificans extends beyond nitrogen cycling; it may also interact with other microbial communities, influencing community structure and function. Understanding its specific metabolic pathways and interactions can provide insights into biogeochemical processes in anaerobic ecosystems. Furthermore, the study of T. denitrificans could reveal important information regarding microbial adaptations to extreme environments, shedding light on the resilience and versatility of life in low-oxygen habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiohalomonadales
FamilyThiohalomonadaceae
GenusThiohalomonas
SpeciesThiohalomonas denitrificans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsaline soil; SS2
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiohalomonas denitrificans strain HLD2 genome assembly, contig:

Gene Summary

Adenine Count

722589 bp

Thymine Count

704579 bp

Guanine Count

1050732 bp

Cytosine Count

1083916 bp

Genome Length

3563632 bp

Protein-coding Genes

3248 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)SAMN03097708_00455Not AvailablePositive489233 - 48975719093.1
lipopolysaccharide export system protein lptcSAMN03097708_00456Not AvailablePositive489754 - 49032021056.9
lipopolysaccharide transport protein lptaSAMN03097708_00457Not AvailablePositive490304 - 49081018589.6
lipopolysaccharide export system atp-binding proteinSAMN03097708_00458Not AvailablePositive490807 - 49155327603.4
rna polymerase, sigma 54 subunit, rpon/siglSAMN03097708_00459Not AvailablePositive491808 - 49328055772.3
putative sigma-54 modulation proteinSAMN03097708_00460Not AvailablePositive493312 - 49362611941.1
pts iia-like nitrogen-regulatory protein ptsnSAMN03097708_00461Not AvailablePositive493652 - 49411616962.3
hpr(ser) kinase/phosphataseSAMN03097708_00462Not AvailablePositive494198 - 49512734718.1
upf0042 nucleotide-binding proteinSAMN03097708_00463Not AvailablePositive495130 - 49599032496.6
pts system, ascorbate-specific iia componentSAMN03097708_00464Not AvailablePositive495990 - 49640014359.3

Displaying genes 481 – 490 of 3319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.