Thiohalomonas denitrificans

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiohalomonadales

Family

Thiohalomonadaceae

Genus

Thiohalomonas

Description

Thiohalomonas denitrificans is a Gram-negative, rod-shaped bacterium that thrives in anaerobic environments. This microbe is characterized by its ability to perform denitrification, a crucial biochemical process that reduces nitrate to nitrogen gas, thereby playing a significant role in the nitrogen cycle. The anaerobic nature of T. denitrificans suggests a specialization for environments devoid of oxygen, where it contributes to the reduction of nitrogen compounds, potentially influencing local nutrient dynamics. The rod shape of T. denitrificans allows for efficient motility and nutrient acquisition in its natural habitat, which may include marine sediments or other anoxic environments. Its metabolic capabilities enable it to utilize various electron donors, thereby enhancing its adaptability to fluctuating environmental conditions. The ecological role of Thiohalomonas denitrificans extends beyond nitrogen cycling; it may also interact with other microbial communities, influencing community structure and function. Understanding its specific metabolic pathways and interactions can provide insights into biogeochemical processes in anaerobic ecosystems. Furthermore, the study of T. denitrificans could reveal important information regarding microbial adaptations to extreme environments, shedding light on the resilience and versatility of life in low-oxygen habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiohalomonadales
FamilyThiohalomonadaceae
GenusThiohalomonas
SpeciesThiohalomonas denitrificans
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
Habitatsaline soil; SS2
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiohalomonas denitrificans strain HLD2 genome assembly, contig:

Gene Summary

Adenine Count

722589 bp

Thymine Count

704579 bp

Guanine Count

1050732 bp

Cytosine Count

1083916 bp

Genome Length

3563632 bp

Protein-coding Genes

3248 genes

Non-Coding Genes

71 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
glycine cleavage system transcriptional repressorSAMN03097708_01023Not AvailableNegative1091880 - 109241619683.9
4-hydroxy-tetrahydrodipicolinate synthaseSAMN03097708_01024Not AvailablePositive1092709 - 109358431437.1
outer membrane protein assembly factor bamcSAMN03097708_01025Not AvailablePositive1093626 - 109472941318.6
phosphoribosyl 1,2-cyclic phosphodiesteraseSAMN03097708_01026Not AvailablePositive1094734 - 109549527318.2
phosphoribosylaminoimidazole-succinocarboxamide synthaseSAMN03097708_01027Not AvailablePositive1095564 - 109627727024.3
dna topoisomerase iv subunit bSAMN03097708_01028Not AvailablePositive1096449 - 109834169199.6
protein of unknown functionSAMN03097708_01029Not AvailablePositive1098423 - 10985544663.34
asparagine synthetase b (glutamine-hydrolyzing)SAMN03097708_01030Not AvailablePositive1099072 - 110079063625.6
cell division topological specificity factorSAMN03097708_01031Not AvailableNegative1100837 - 110109410037.1
septum site-determining protein mindSAMN03097708_01032Not AvailableNegative1101103 - 110189428312.9

Displaying genes 1021 – 1030 of 3319 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.