Methanocorpusculum labreanum Z

CocciNon-motileAnaerobe

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanomicrobiales

Family

Methanocorpusculaceae

Genus

Methanocorpusculum

Description

Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) is an anaerobic methanogenic archaeon phylogenetically associated with the Euryarchaeota. Methanocorpusculum labreanum was isolated from surface sediment from the LaBrea Tar Pits in Los Angeles, California. (HAMAP: METLZ)

Taxonomy

Kingdom	Methanobacteriati
Phylum	Methanobacteriota
Class	Methanomicrobia
Order	Methanomicrobiales
Family	Methanocorpusculaceae
Genus	Methanocorpusculum
Species	Methanocorpusculum labreanum
Strain	Z

Profile

Physiology
Gram staining properties	Not Available
Shape	Cocci
Mobility	No
Flagellar presence	Yes
Number of membranes	1

Ecology, Host, and Life Cycle
Oxygen requirements	Anaerobe
Optimal temperature	37
Temperature range	Mesophilic
Habitat	Aquatic
Biotic relationship	Free living
Host(s)	Not Available
Cell arrangement	Not Available
Sporulation	Nonsporulating
Energy source	Lithotroph
Pathogenicity	No

Genome Summary

Methanocorpusculum labreanum Z, complete sequence.

NC_008942.1

Gene Summary

Adenine Count

450744 bp

Thymine Count

451618 bp

Guanine Count

449479 bp

Cytosine Count

453121 bp

Genome Length

1804962 bp

Protein-coding Genes

1806 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

Genes

Name	Locus Tag	UniProt ID	Strand Orientation	Gene Start/End	Protein Molecular Weight
hypothetical protein	MLAB_RS09165	Not Available	Negative	1777381 - 1777800	15354.1
hypothetical protein	MLAB_RS09915	Not Available	Negative	1778281 - 1778427	5039.57
hypothetical protein	MLAB_RS09170	Not Available	Negative	1778856 - 1779530	24980.8
hypothetical protein	MLAB_RS09480	Not Available	Positive	1779727 - 1780173	15979.2
hypothetical protein	MLAB_RS09180	Not Available	Positive	1780202 - 1781023	30748.9
hypothetical protein	MLAB_RS09185	Not Available	Negative	1781657 - 1781938	10427.9
tyrosine--trna ligase	MLAB_RS09190	Not Available	Positive	1782088 - 1783041	35168.6
phosphotransferase family protein	MLAB_RS09195	Not Available	Positive	1783054 - 1783965	35085.8
flavodoxin family protein	MLAB_RS09200	Not Available	Positive	1783998 - 1784702	26865.4
flavodoxin family protein	MLAB_RS09205	Not Available	Positive	1784776 - 1785480	26801.2

Displaying genes 1841 – 1850 of 1869 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolite ID	Metabolite name	Structure	CAS number	Average mass Monoisotopic mass
BASm0001717	fumarateC4H2O4		Not available	Average114.0563Da Monoisotopic113.9953086Da
BASm0001779	orotateC5H3N2O4		Not available	Average155.09Da Monoisotopic155.0098302Da
BASm0001865	diphosphateHO7P2		Not available	Average174.95Da Monoisotopic174.9213971Da
BASm0002157	7-cyano-7-deazaguanineC7H5N5O		Not available	Average175.1475Da Monoisotopic175.0494098Da
BASm0002305	(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4		Not available	Average145.135Da Monoisotopic145.0506324Da
BASm0002307	(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4		Not available	Average147.1491Da Monoisotopic147.06573384Da
BASm0002751	(S)-4-amino-5-oxopentanoateC5H9NO3		Not available	Average131.1299Da Monoisotopic131.0582432Da
BASm0002780	orotidine 5'-phosphateC10H10N2O11P	Not available	`2149-82-8`	Average365.168Da Monoisotopic365.003866888Da
BASm0002826	(2R)-3-phospho-glyceroyl phosphateC3H4O10P2		Not available	Average262.005Da Monoisotopic261.9301646Da
BASm0002909	O-acetyl-L-homoserineC6H11NO4		`7540-67-2`	Average161.1558Da Monoisotopic161.0688078Da

Displaying 1–10 of 83 metabolites

Health Effects

No health effects information available for this bacterium.