Methanocorpusculum labreanum Z

CocciNon-motileAnaerobe

Kingdom

Methanobacteriati

Phylum

Methanobacteriota

Class

Methanomicrobia

Order

Methanomicrobiales

Family

Methanocorpusculaceae

Genus

Methanocorpusculum

Description

Methanocorpusculum labreanum (strain ATCC 43576 / DSM 4855 / Z) is an anaerobic methanogenic archaeon phylogenetically associated with the Euryarchaeota. Methanocorpusculum labreanum was isolated from surface sediment from the LaBrea Tar Pits in Los Angeles, California. (HAMAP: METLZ)

Taxonomy

KingdomMethanobacteriati
PhylumMethanobacteriota
ClassMethanomicrobia
OrderMethanomicrobiales
FamilyMethanocorpusculaceae
GenusMethanocorpusculum
SpeciesMethanocorpusculum labreanum
StrainZ

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceLithotroph
PathogenicityNo

Genome Summary

Methanocorpusculum labreanum Z, complete sequence.

Gene Summary

Adenine Count

450744 bp

Thymine Count

451618 bp

Guanine Count

449479 bp

Cytosine Count

453121 bp

Genome Length

1804962 bp

Protein-coding Genes

1806 genes

Non-Coding Genes

63 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-quinone oxidoreductase subunit cMLAB_RS05045Not AvailablePositive951196 - 95177721968.4
nickel-dependent hydrogenase large subunitMLAB_RS05050Not AvailablePositive951778 - 95299844892.2
respiratory chain complex i subunit 1 family proteinMLAB_RS05055Not AvailablePositive952995 - 95399635498.2
4fe-4s binding proteinMLAB_RS05060Not AvailablePositive953998 - 95443815918.7
gnat family n-acetyltransferaseMLAB_RS05065Not AvailablePositive954435 - 95491718080.6
vwa domain-containing proteinMLAB_RS05070Not AvailableNegative955515 - 95699356938.5
aaa family atpaseMLAB_RS05075Not AvailableNegative956977 - 95858161603.5
duf362 domain-containing proteinMLAB_RS05085Not AvailablePositive959089 - 96023742265.6
protoporphyrinogen/coproporphyrinogen oxidaseMLAB_RS05090Not AvailablePositive960330 - 96164949222.0
glycosyltransferase family 4 proteinMLAB_RS05095Not AvailablePositive961640 - 96261436508.9

Displaying genes 1011 – 1020 of 1869 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

83 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001779orotateC5H3N2O4Chemical structure of orotateNot available
Average155.09Da
Monoisotopic155.0098302Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00021577-cyano-7-deazaguanineC7H5N5OChemical structure of 7-cyano-7-deazaguanineNot available
Average175.1475Da
Monoisotopic175.0494098Da
BASm0002305(S)-2-ethyl-2-hydroxy-3-oxobutanoateC6H9O4Chemical structure of (S)-2-ethyl-2-hydroxy-3-oxobutanoateNot available
Average145.135Da
Monoisotopic145.0506324Da
BASm0002307(2R,3R)-2,3-dihydroxy-3-methylpentanoateC6H11O4Chemical structure of (2R,3R)-2,3-dihydroxy-3-methylpentanoateNot available
Average147.1491Da
Monoisotopic147.06573384Da
BASm0002751(S)-4-amino-5-oxopentanoateC5H9NO3Chemical structure of (S)-4-amino-5-oxopentanoateNot available
Average131.1299Da
Monoisotopic131.0582432Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0002826(2R)-3-phospho-glyceroyl phosphateC3H4O10P2Chemical structure of (2R)-3-phospho-glyceroyl phosphateNot available
Average262.005Da
Monoisotopic261.9301646Da
BASm0002909O-acetyl-L-homoserineC6H11NO4Chemical structure of O-acetyl-L-homoserine7540-67-2
Average161.1558Da
Monoisotopic161.0688078Da

Displaying 1–10 of 83 metabolites

Health Effects

No health effects information available for this bacterium.