Kingdom
Bacillati
Phylum
Bacillota
Class
Clostridia
Order
Lachnospirales
Family
Lachnospiraceae
Genus
Allocoprococcus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Bacillota |
| Class | Clostridia |
| Order | Lachnospirales |
| Family | Lachnospiraceae |
| Genus | Allocoprococcus |
| Species | Allocoprococcus comes |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Cocci |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | human gut |
| Biotic relationship | Not Available |
| Host(s) | Homo sapiens |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Coprococcus comes strain AF16-31 AF16-31.Scaf59, whole genome
Gene Summary
Adenine Count
1026397 bp
Thymine Count
953442 bp
Guanine Count
768455 bp
Cytosine Count
676401 bp
Genome Length
3424883 bp
Protein-coding Genes
3102 genes
Non-Coding Genes
110 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pyridoxamine kinase | DWX03_14715 | Not Available | Negative | 3008831 - 3009727 | 32814.3 |
| plp-dependent aminotransferase family protein | DWX03_14720 | Not Available | Positive | 3009808 - 3011130 | 50696.2 |
| arac family transcriptional regulator | DWX03_14725 | Not Available | Positive | 3011131 - 3011967 | 33443.0 |
| sugar abc transporter substrate-binding protein | DWX03_14730 | Not Available | Positive | 3012080 - 3012283 | 7365.8 |
| duf4867 family protein | DWX03_14735 | Not Available | Positive | 3012417 - 3013037 | 22680.1 |
| fucose isomerase | DWX03_14740 | Not Available | Positive | 3013072 - 3014556 | 55197.3 |
| xylulokinase | DWX03_14745 | Not Available | Positive | 3014889 - 3016358 | 53880.4 |
| hypothetical protein | DWX03_14750 | Not Available | Positive | 3016484 - 3016951 | 17706.6 |
| flavodoxin-dependent (e)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase | DWX03_14755 | Not Available | Positive | 3017026 - 3018081 | 37636.2 |
| polc-type dna polymerase iii | DWX03_14760 | Not Available | Positive | 3018085 - 3022692 | 173658.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
