Shewanella baltica OS223

Gram-negativeRodMotileAerobe; anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Alteromonadales

Family

Shewanellaceae

Genus

Shewanella

Description

Shewanella are facultatively anaerobic, Gram-negative bacteria, motile by polar flagella, rod-like, and generally associated with aquatic or marine environments. They are capable of using a variety of compounds as electron acceptors, including oxygen, iron, manganese, uranium, nitrate, nitrite, fumarate, to name but a few. This ability makes Shewanella important for bioremediation of contaminated metals and radioactive wastes. The genus Shewanella comprises 36 recognized and hundreds of uncharacterized cultivable species.Shewanella baltica, isolated from the Baltic Sea, is able to grow at 4 degrees C but not 37, unlike other Shewanella species. Under anaerobic conditions, oxidation of organic matter can be coupled to the reduction of nitrate, Fe(III) and sulfur compounds. Shewanella baltica OS223 was isolated from the Baltic Sea at 120 m. (HAMAP: SHEB2)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderAlteromonadales
FamilyShewanellaceae
GenusShewanella
SpeciesShewanella baltica
StrainOS223

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Shewanella baltica OS223
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe; anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatAquatic
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceHeterotroph
PathogenicityNo

Genome Summary

Shewanella baltica OS223 plasmid pS22301, complete sequence.

Gene Summary

Adenine Count

25746 bp

Thymine Count

23388 bp

Guanine Count

18818 bp

Cytosine Count

20359 bp

Genome Length

88311 bp

Protein-coding Genes

84 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
yebc/pmpr family dna-binding transcriptional regulatorSBAL223_RS15680Not AvailablePositive3633086 - 363380826781.6
carotenoid oxygenase family proteinSBAL223_RS15685Not AvailableNegative3633873 - 363554960669.7
duf2141 domain-containing proteinSBAL223_RS15690Not AvailableNegative3635564 - 363605817625.8
sensor histidine kinaseSBAL223_RS15695Not AvailablePositive3636242 - 363742043406.4
response regulator transcription factorSBAL223_RS15700Not AvailablePositive3637449 - 363809923578.6
duf6622 family proteinSBAL223_RS15705Not AvailablePositive3638208 - 363873219124.0
ribosome hibernation-promoting factor, hpf/yfia familySBAL223_RS15710Not AvailableNegative3638823 - 363917913170.8
methyl-accepting chemotaxis proteinSBAL223_RS15715Not AvailableNegative3639428 - 364099657428.1
alpha-1,6-glucosidase domain-containing proteinSBAL223_RS15720Not AvailableNegative3641349 - 3645671155552.0
tonb-dependent receptorSBAL223_RS15725Not AvailableNegative3645777 - 3648743108058.0

Displaying genes 3231 – 3240 of 4635 in total

Metabolites

179 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001661Cu(2+)CuChemical structure of Cu(2+)7440-50-8
Average63.546Da
Monoisotopic62.929601079Da
BASm0001691hydrogenselenideHSeChemical structure of hydrogenselenideNot available
Average79.98Da
Monoisotopic80.924896Da
BASm0001697(S)-4,5-dihydroxypentane-2,3-dioneC5H8O4Chemical structure of (S)-4,5-dihydroxypentane-2,3-dioneNot available
Average132.1146Da
Monoisotopic132.042258744Da
BASm0001717fumarateC4H2O4Chemical structure of fumarateNot available
Average114.0563Da
Monoisotopic113.9953086Da
BASm0001845nicotinateC6H4NO2Chemical structure of nicotinateNot available
Average122.1015Da
Monoisotopic122.0242034Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da

Displaying 1–10 of 179 metabolites

Health Effects

No health effects information available for this bacterium.