Burkholderia orbicola MC0-3

Gram-negativeRodNon-motileFacultative aerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia orbicola MC0-3 is a Gram-negative, rod-shaped bacterium that exhibits facultative aerobic respiration. This organism is characterized by its nonsporulating nature, indicating a reliance on alternative survival strategies under varying environmental conditions. B. orbicola MC0-3 has been isolated from multiple habitats, suggesting its adaptability and potential ecological versatility. The facultative aerobic metabolism allows B. orbicola MC0-3 to thrive in both oxygen-rich and oxygen-depleted environments, which may contribute to its widespread distribution in diverse ecological niches. The absence of sporulation implies that this bacterium may utilize other mechanisms for survival under unfavorable conditions, such as forming biofilms or entering a viable but non-culturable state. Understanding the traits of Burkholderia orbicola MC0-3 provides insight into its ecological role and potential applications in bioremediation or agricultural contexts, where its adaptability may be leveraged for beneficial purposes. Further research into its metabolic pathways and interactions with other microorganisms in its habitats could reveal additional ecological functions and applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia orbicola
StrainMC0-3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Burkholderia orbicola MC0-3
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia orbicola MC0-3 chromosome 1, complete sequence.

Gene Summary

Adenine Count

588987 bp

Thymine Count

586775 bp

Guanine Count

1180313 bp

Cytosine Count

1176808 bp

Genome Length

3532883 bp

Protein-coding Genes

3167 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
carbohydrate abc transporter permeaseBCENMC03_RS23030Not AvailableNegative1564328 - 156517931480.8
carbohydrate abc transporter permeaseBCENMC03_RS23035Not AvailableNegative1565201 - 156614534585.0
abc transporter substrate-binding proteinBCENMC03_RS23040Not AvailableNegative1566200 - 156745946338.2
beta-galactosidaseBCENMC03_RS23045Not AvailableNegative1567526 - 156952074332.5
abc transporter atp-binding proteinBCENMC03_RS23050Not AvailableNegative1569530 - 157068741408.9
laci family dna-binding transcriptional regulatorBCENMC03_RS23055Not AvailablePositive1570877 - 157193237026.6
tetr/acrr family transcriptional regulatorBCENMC03_RS23060Not AvailablePositive1572074 - 157278125573.0
gntr family transcriptional regulatorBCENMC03_RS23065Not AvailableNegative1572924 - 157356523964.9
osmc family proteinBCENMC03_RS23070Not AvailablePositive1573696 - 157417217453.4
lysr substrate-binding domain-containing proteinBCENMC03_RS23075Not AvailableNegative1574191 - 157514134054.6

Displaying genes 5831 – 5840 of 7292 in total

Metabolites

1779 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm00005992,5-dihydroxypyridineC5H5NO2Chemical structure of 2,5-dihydroxypyridineNot available
Average111.1Da
Monoisotopic111.0320284Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da

Displaying 1–10 of 1779 metabolites

Health Effects

No health effects information available for this bacterium.