Burkholderia orbicola MC0-3

Gram-negativeRodNon-motileFacultative aerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Burkholderiaceae

Genus

Burkholderia

Description

Burkholderia orbicola MC0-3 is a Gram-negative, rod-shaped bacterium that exhibits facultative aerobic respiration. This organism is characterized by its nonsporulating nature, indicating a reliance on alternative survival strategies under varying environmental conditions. B. orbicola MC0-3 has been isolated from multiple habitats, suggesting its adaptability and potential ecological versatility. The facultative aerobic metabolism allows B. orbicola MC0-3 to thrive in both oxygen-rich and oxygen-depleted environments, which may contribute to its widespread distribution in diverse ecological niches. The absence of sporulation implies that this bacterium may utilize other mechanisms for survival under unfavorable conditions, such as forming biofilms or entering a viable but non-culturable state. Understanding the traits of Burkholderia orbicola MC0-3 provides insight into its ecological role and potential applications in bioremediation or agricultural contexts, where its adaptability may be leveraged for beneficial purposes. Further research into its metabolic pathways and interactions with other microorganisms in its habitats could reveal additional ecological functions and applications.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyBurkholderiaceae
GenusBurkholderia
SpeciesBurkholderia orbicola
StrainMC0-3

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Burkholderia orbicola MC0-3
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative aerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Burkholderia orbicola MC0-3 chromosome 1, complete sequence.

Gene Summary

Adenine Count

588987 bp

Thymine Count

586775 bp

Guanine Count

1180313 bp

Cytosine Count

1176808 bp

Genome Length

3532883 bp

Protein-coding Genes

3167 genes

Non-Coding Genes

139 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
duf3443 domain-containing proteinBCENMC03_RS22170Not AvailableNegative1372089 - 137332442438.5
duf2844 domain-containing proteinBCENMC03_RS22175Not AvailableNegative1373342 - 137383316964.2
ompw family proteinBCENMC03_RS22180Not AvailableNegative1374264 - 137498925353.8
acyl-coa synthetaseBCENMC03_RS22185Not AvailableNegative1375091 - 137705271036.6
fumarylacetoacetate hydrolase family proteinBCENMC03_RS22190Not AvailableNegative1377049 - 137800535410.4
voc family proteinBCENMC03_RS22195Not AvailableNegative1378039 - 137910939164.5
bifunctional 3-(3-hydroxy-phenyl)propionate/3-hydroxycinnamic acid hydroxylaseBCENMC03_RS22200Not AvailableNegative1379117 - 138082962139.9
tetr/acrr family transcriptional regulatorBCENMC03_RS22205Not AvailablePositive1380930 - 138170928137.7
mfs transporterBCENMC03_RS22210Not AvailableNegative1381962 - 138321844573.0
2og-fe dioxygenase family proteinBCENMC03_RS39220Not AvailableNegative1383225 - 13833745485.52

Displaying genes 5641 – 5650 of 7292 in total

Metabolites

1779 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm00005166-deoxyerythronolide BC21H38O6Chemical structure of 6-deoxyerythronolide BNot available
Average386.5228Da
Monoisotopic386.2668389Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm00005992,5-dihydroxypyridineC5H5NO2Chemical structure of 2,5-dihydroxypyridineNot available
Average111.1Da
Monoisotopic111.0320284Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da

Displaying 1–10 of 1779 metabolites

Health Effects

No health effects information available for this bacterium.