Escherichia coli APEC O1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli APEC O1 is a gram-negative, rod-shaped bacterium that prefers mesophilic temperatures, exhibiting optimal growth between 37°C, making it well-suited to the warm-blooded environments in which it often resides. As a chemoheterotroph, it derives its energy and carbon from organic compounds, highlighting its reliance on the metabolic byproducts of other organisms. This strain is primarily associated with the intestinal tracts of humans and animals, particularly in the gut flora, but can also be found in various body sites across different species, including the urogenital tract, respiratory system, and bloodstream, especially in cases of infection. As a facultative anaerobe, E. coli APEC O1 can survive and grow in both the presence and absence of oxygen, allowing it to thrive in diverse ecological niches. This adaptability enables the bacterium to exploit both aerobic and anaerobic conditions, providing it a competitive advantage in various environments. One of the significant aspects of E. coli APEC O1 is its role in avian pathogenicity, where it can cause severe infections in poultry, leading to substantial economic losses in the poultry industry. This strain possesses virulence factors that facilitate colonization and invasion of host tissues, leading to conditions such as septicemia and colibacillosis. Additionally, E. coli APEC O1 has been subject to extensive genetic studies, revealing insights into its pathogenic mechanisms and resistance traits, including its ability to evade the host immune response. As antibiotic resistance becomes a growing concern, understanding this microbe's genetics is crucial for developing effective treatments and prevention strategies in both veterinary and human medicine.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli APEC O1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-hydroxy-3-methylbut-2-enyl diphosphate reductaseAPECO1_RS00145B7UI74Positive27768 - 2871834721.4
ribonucleoside hydrolase rihcAPECO1_RS00150B7MAF0Positive28784 - 2969832601.7
duf805 domain-containing proteinAPECO1_RS00155Not AvailablePositive29721 - 3008613660.0
4-hydroxy-tetrahydrodipicolinate reductaseAPECO1_RS00160B7MAF2Positive30247 - 3106828772.4
glutamine-hydrolyzing carbamoyl-phosphate synthase small subunitAPECO1_RS00175Q8FLB1Positive31524 - 3267241417.4
carbamoyl-phosphate synthase large subunitAPECO1_RS00180Q8FLB0Positive32690 - 35911117930.0
is200/is605-like element is200c family transposaseAPECO1_RS00190P59697Positive36135 - 3659318028.0
carnitine metabolism transcriptional regulator caifAPECO1_RS00200P0AE58Positive36883 - 3727815363.0
carnitine operon protein caieAPECO1_RS00205B7MAF8Negative37397 - 3798721160.6
crotonobetainyl-coa hydrataseAPECO1_RS00210Q0TLV3Negative37993 - 3877828177.8

Displaying genes 851 – 860 of 5481 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.