Escherichia coli APEC O1

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Escherichia

Description

Escherichia coli APEC O1 is a gram-negative, rod-shaped bacterium that prefers mesophilic temperatures, exhibiting optimal growth between 37°C, making it well-suited to the warm-blooded environments in which it often resides. As a chemoheterotroph, it derives its energy and carbon from organic compounds, highlighting its reliance on the metabolic byproducts of other organisms. This strain is primarily associated with the intestinal tracts of humans and animals, particularly in the gut flora, but can also be found in various body sites across different species, including the urogenital tract, respiratory system, and bloodstream, especially in cases of infection. As a facultative anaerobe, E. coli APEC O1 can survive and grow in both the presence and absence of oxygen, allowing it to thrive in diverse ecological niches. This adaptability enables the bacterium to exploit both aerobic and anaerobic conditions, providing it a competitive advantage in various environments. One of the significant aspects of E. coli APEC O1 is its role in avian pathogenicity, where it can cause severe infections in poultry, leading to substantial economic losses in the poultry industry. This strain possesses virulence factors that facilitate colonization and invasion of host tissues, leading to conditions such as septicemia and colibacillosis. Additionally, E. coli APEC O1 has been subject to extensive genetic studies, revealing insights into its pathogenic mechanisms and resistance traits, including its ability to evade the host immune response. As antibiotic resistance becomes a growing concern, understanding this microbe's genetics is crucial for developing effective treatments and prevention strategies in both veterinary and human medicine.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEscherichia
SpeciesEscherichia coli
StrainO1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Escherichia coli APEC O1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementPairs - Singles
SporulationNonsporulating
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Escherichia coli APEC O1 plasmid pAPEC-O1-R, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

Not Available

Non-Coding Genes

Not Available

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ynam/ynft family proteinAPECO1_RS31400P0DPO4Negative5048620 - 50487333983.04
Hypothetical proteinAPECO1_RS25500P58218Negative5049160 - 50494089392.14
AttrNot AvailableNot AvailablePositive5049676 - 5049689Not Available
thr operon leader peptideAPECO1_RS00005Not AvailablePositive171 - 2362138.61
bifunctional aspartate kinase/homoserine dehydrogenase iAPECO1_RS00010P00561Positive317 - 277989125.5
homoserine kinaseAPECO1_RS00015A7ZH92Positive2781 - 371333611.6
threonine synthaseAPECO1_RS00020P00934Positive3714 - 500047068.4
duf2502 domain-containing proteinAPECO1_RS00030P75616Positive5214 - 551011610.7
peroxide stress protein yaaaAPECO1_RS00035B7M9R9Negative5550 - 632629598.6
sodium:alanine symporter family proteinAPECO1_RS00040P30143Negative6396 - 782651682.0

Displaying genes 821 – 830 of 5481 in total

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.