Nocardioides daphniae

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides daphniae is a Gram-positive, rod-shaped bacterium that thrives in aerobic environments, with an optimal growth temperature of 29.0°C. This microbe is characterized by its non-spore-forming nature, which may influence its survival strategies and ecological interactions. The Gram-positive nature of N. daphniae indicates that it possesses a thick peptidoglycan layer in its cell wall, a feature that is commonly associated with increased resistance to certain environmental stresses. Its rod shape may also confer advantages in mobility and nutrient absorption within its ecological niche. While the specific ecological role of Nocardioides daphniae remains to be fully elucidated, its aerobic metabolism suggests that it could play a significant role in nutrient cycling within oxygen-rich environments, potentially contributing to the degradation of organic matter. The optimal growth temperature of 29.0°C aligns with conditions often found in various aquatic environments, hinting at its possible association with freshwater ecosystems, where it may interact with other microorganisms and contribute to the overall microbial community dynamics. This positioning within the ecosystem may allow N. daphniae to participate in the breakdown of complex organic substances, thereby facilitating nutrient availability for other organisms.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides daphniae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides daphniae strain JCM 16608 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3767 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
nadh-quinone oxidoreductase subunit nuonE2C04_RS15415Not AvailableNegative3127976 - 312958355756.7
nadh-quinone oxidoreductase subunit mE2C04_RS15420Not AvailableNegative3129580 - 313114254490.0
nadh-quinone oxidoreductase subunit lE2C04_RS15425Not AvailableNegative3131139 - 313312769600.3
nadh-quinone oxidoreductase subunit nuokE2C04_RS15430Not AvailableNegative3133138 - 313343710637.5
nadh-quinone oxidoreductase subunit jE2C04_RS15435Not AvailableNegative3133434 - 313421927192.5
nadh-quinone oxidoreductase subunit nuoiE2C04_RS15440Not AvailableNegative3134216 - 313479421679.7
nadh-quinone oxidoreductase subunit nuohE2C04_RS15445Not AvailableNegative3134794 - 313611947611.6
nadh-quinone oxidoreductase subunit gE2C04_RS15450Not AvailableNegative3136119 - 313814670528.5
2fe-2s iron-sulfur cluster-binding proteinE2C04_RS21650Not AvailableNegative3138043 - 313857318823.7
nadh-quinone oxidoreductase subunit nuofE2C04_RS15455Not AvailableNegative3138570 - 313988047054.9

Displaying genes 3361 – 3370 of 3806 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.