Nocardioides daphniae

rodaerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Propionibacteriales

Family

Nocardioidaceae

Genus

Nocardioides

Description

Nocardioides daphniae is a Gram-positive, rod-shaped bacterium that thrives in aerobic environments, with an optimal growth temperature of 29.0°C. This microbe is characterized by its non-spore-forming nature, which may influence its survival strategies and ecological interactions. The Gram-positive nature of N. daphniae indicates that it possesses a thick peptidoglycan layer in its cell wall, a feature that is commonly associated with increased resistance to certain environmental stresses. Its rod shape may also confer advantages in mobility and nutrient absorption within its ecological niche. While the specific ecological role of Nocardioides daphniae remains to be fully elucidated, its aerobic metabolism suggests that it could play a significant role in nutrient cycling within oxygen-rich environments, potentially contributing to the degradation of organic matter. The optimal growth temperature of 29.0°C aligns with conditions often found in various aquatic environments, hinting at its possible association with freshwater ecosystems, where it may interact with other microorganisms and contribute to the overall microbial community dynamics. This positioning within the ecosystem may allow N. daphniae to participate in the breakdown of complex organic substances, thereby facilitating nutrient availability for other organisms.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPropionibacteriales
FamilyNocardioidaceae
GenusNocardioides
SpeciesNocardioides daphniae
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-positive
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Nocardioides daphniae strain JCM 16608 chromosome, complete

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

3767 genes

Non-Coding Genes

69 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
methyl-accepting chemotaxis proteinE2C04_RS14830Not AvailableNegative3015792 - 301626816177.8
methyl-accepting chemotaxis proteinE2C04_RS14835Not AvailableNegative3016344 - 301793655722.4
methyl-accepting chemotaxis proteinE2C04_RS14840Not AvailableNegative3018030 - 301959854738.0
chemotaxis protein chewE2C04_RS14845Not AvailableNegative3019629 - 302004814900.0
chemotaxis protein cheaE2C04_RS14850Not AvailableNegative3020045 - 302233381487.7
carbon storage regulator csraE2C04_RS14855Not AvailableNegative3022460 - 30226968260.92
flagellar assembly protein fliwE2C04_RS14860Not AvailableNegative3022740 - 302318916106.2
flagellinE2C04_RS14865Not AvailableNegative3023186 - 302407931654.4
flagellar hook-associated protein flgkE2C04_RS14870Not AvailableNegative3024076 - 302545547187.9
flagellar protein flgnE2C04_RS14875Not AvailableNegative3025458 - 302593417337.8

Displaying genes 3231 – 3240 of 3806 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.