Undibacterium pigrum str. DSM 19792

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Undibacterium

Description

Undibacterium pigrum str. DSM 19792 is a Gram-negative, rod-shaped bacterium that requires oxygen for growth, classifying it as an aerobic organism. This strain does not form spores, which is characteristic of its metabolic adaptations and ecological niche. The lack of sporulation may suggest a reliance on stable environmental conditions for survival, as well as a potential sensitivity to extreme stressors that typically trigger sporulation in other bacterial species. The morphology of Undibacterium pigrum, being rod-shaped, may influence its motility and interaction with its environment, although specific motility traits are not provided. The aerobic nature of this bacterium indicates that it likely occupies niches where oxygen is readily available, such as surface waters or soils with good aeration. Given the traits of Undibacterium pigrum, further research could explore its role in biogeochemical cycles, particularly in oxygen-rich environments where it may contribute to nutrient cycling or organic matter degradation. The specific metabolic pathways and ecological interactions of this strain remain to be elucidated, but its aerobic nature positions it as a potentially important player in microbial communities that thrive in well-oxygenated habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusUndibacterium
SpeciesUndibacterium pigrum
StrainDSM 19792

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Undibacterium pigrum strain DSM 19792 Ga0244539_144, whole genome

Gene Summary

Adenine Count

1578919 bp

Thymine Count

1581259 bp

Guanine Count

1625272 bp

Cytosine Count

1620275 bp

Genome Length

6407125 bp

Protein-coding Genes

5713 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
vanz family proteinDFR42_11710Not AvailablePositive5824807 - 582600043923.5
(2fe-2s) ferredoxinDFR42_11711Not AvailablePositive5826077 - 582639411877.2
hypothetical proteinDFR42_11712Not AvailablePositive5826400 - 582703822869.6
d-alanyl-d-alanine carboxypeptidase (penicillin-binding protein 5/6)DFR42_11713Not AvailablePositive5827038 - 582833647214.1
d-alanine transaminaseDFR42_11714Not AvailablePositive5828476 - 582932431044.7
hypothetical proteinDFR42_11715Not AvailableNegative5829479 - 583014423442.1
lysr family transcriptional regulatorDFR42_11716Not AvailablePositive5830250 - 583120935173.4
hypothetical proteinDFR42_11717Not AvailablePositive5831307 - 583158810518.8
lysr family glycine cleavage system transcriptional activatorDFR42_11718Not AvailableNegative5831696 - 583263134763.8
hypothetical proteinDFR42_11719Not AvailablePositive5832803 - 583312011243.4

Displaying genes 5261 – 5270 of 5799 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.