Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Undibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Undibacterium |
| Species | Undibacterium pigrum |
| Strain | DSM 19792 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578919 bp
Thymine Count
1581259 bp
Guanine Count
1625272 bp
Cytosine Count
1620275 bp
Genome Length
6407125 bp
Protein-coding Genes
5713 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide biosynthesis regulator ycim | DFR42_10887 | Not Available | Positive | 4643971 - 4645146 | 44598.7 |
| udp-glucose dehydrogenase | DFR42_10888 | Not Available | Positive | 4645242 - 4646675 | 52447.7 |
| d-alpha,beta-d-heptose 7-phosphate 1-kinase | DFR42_10889 | Not Available | Positive | 4646684 - 4647634 | 34225.4 |
| phospholipase d-like protein | DFR42_10890 | Not Available | Positive | 4647714 - 4648307 | 21772.0 |
| aromatic ring-opening dioxygenase catalytic subunit (ligb family) | DFR42_10891 | Not Available | Negative | 4648331 - 4649134 | 29245.0 |
| lysr family transcriptional regulator | DFR42_10892 | Not Available | Positive | 4649290 - 4650174 | 32241.1 |
| competence protein comea | DFR42_10893 | Not Available | Positive | 4650324 - 4650794 | 14947.7 |
| cysteine synthase | DFR42_10894 | Not Available | Positive | 4651116 - 4652018 | 32777.6 |
| hypothetical protein | DFR42_10895 | Not Available | Negative | 4652290 - 4652589 | 11300.8 |
| membrane-bound lytic murein transglycosylase b | DFR42_10896 | Not Available | Negative | 4652925 - 4654052 | 41498.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
