Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Undibacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Undibacterium |
| Species | Undibacterium pigrum |
| Strain | DSM 19792 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | non-spore-forming |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1578919 bp
Thymine Count
1581259 bp
Guanine Count
1625272 bp
Cytosine Count
1620275 bp
Genome Length
6407125 bp
Protein-coding Genes
5713 genes
Non-Coding Genes
86 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome oxidase assembly protein shyy1 | DFR42_106182 | Not Available | Positive | 4029995 - 4030708 | 26776.0 |
| cytochrome oxidase cu insertion factor (sco1/senc/prrc family) | DFR42_106183 | Not Available | Positive | 4030695 - 4031300 | 22690.7 |
| cytochrome c oxidase assembly protein subunit 15 | DFR42_106184 | Not Available | Positive | 4031333 - 4032424 | 39972.2 |
| protoheme ix farnesyltransferase | DFR42_106185 | Not Available | Positive | 4032421 - 4033305 | 33071.4 |
| protein sco1/2 | DFR42_106186 | Not Available | Positive | 4033302 - 4033892 | 21532.2 |
| rna polymerase rpoh-like sigma 32 subunit | DFR42_106187 | Not Available | Negative | 4034011 - 4034907 | 33327.8 |
| cell division transport system permease protein | DFR42_106188 | Not Available | Negative | 4035238 - 4036152 | 32611.5 |
| cell division transport system atp-binding protein | DFR42_106189 | Not Available | Negative | 4036183 - 4036857 | 24085.3 |
| signal recognition particle-docking protein ftsy | DFR42_106190 | Not Available | Negative | 4036917 - 4038047 | 39939.6 |
| 16s rrna (guanine(966)-n(2))-methyltransferase rsmd | DFR42_106191 | Not Available | Positive | 4038128 - 4038823 | 25607.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
