Undibacterium pigrum str. DSM 19792

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Undibacterium

Description

Undibacterium pigrum str. DSM 19792 is a Gram-negative, rod-shaped bacterium that requires oxygen for growth, classifying it as an aerobic organism. This strain does not form spores, which is characteristic of its metabolic adaptations and ecological niche. The lack of sporulation may suggest a reliance on stable environmental conditions for survival, as well as a potential sensitivity to extreme stressors that typically trigger sporulation in other bacterial species. The morphology of Undibacterium pigrum, being rod-shaped, may influence its motility and interaction with its environment, although specific motility traits are not provided. The aerobic nature of this bacterium indicates that it likely occupies niches where oxygen is readily available, such as surface waters or soils with good aeration. Given the traits of Undibacterium pigrum, further research could explore its role in biogeochemical cycles, particularly in oxygen-rich environments where it may contribute to nutrient cycling or organic matter degradation. The specific metabolic pathways and ecological interactions of this strain remain to be elucidated, but its aerobic nature positions it as a potentially important player in microbial communities that thrive in well-oxygenated habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusUndibacterium
SpeciesUndibacterium pigrum
StrainDSM 19792

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Undibacterium pigrum strain DSM 19792 Ga0244539_144, whole genome

Gene Summary

Adenine Count

1578919 bp

Thymine Count

1581259 bp

Guanine Count

1625272 bp

Cytosine Count

1620275 bp

Genome Length

6407125 bp

Protein-coding Genes

5713 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
putative mfs family arabinose efflux permeaseDFR42_101111Not AvailableNegative115086 - 11637545857.8
dna polymerase-3 subunit epsilonDFR42_101112Not AvailablePositive116848 - 11771131523.2
pot family proton-dependent oligopeptide transporterDFR42_101113Not AvailableNegative117761 - 11939859690.4
putative sulfurylase large subunit (molybdopterin cytosine dinucleotide biosynthesis) /predicted sulfurylase small subunit (molybdopterin cytosine dinucleotide biosynthesis)DFR42_101114Not AvailablePositive119437 - 12042635777.1
phzf family phenazine biosynthesis proteinDFR42_101115Not AvailablePositive120456 - 12132531033.0
3,4-dihydroxy 2-butanone 4-phosphate synthase/gtp cyclohydrolase iiDFR42_101116Not AvailablePositive121494 - 12261240451.9
6,7-dimethyl-8-ribityllumazine synthaseDFR42_101117Not AvailablePositive122713 - 12321017505.8
nusb antitermination factorDFR42_101118Not AvailablePositive123328 - 12379217236.6
aspartate/methionine/tyrosine aminotransferaseDFR42_101119Not AvailablePositive123895 - 12506142432.0
transglycosylase-like protein with slt domainDFR42_101120Not AvailableNegative125142 - 12609234018.3

Displaying genes 121 – 130 of 5799 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.