Undibacterium pigrum str. DSM 19792

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Oxalobacteraceae

Genus

Undibacterium

Description

Undibacterium pigrum str. DSM 19792 is a Gram-negative, rod-shaped bacterium that requires oxygen for growth, classifying it as an aerobic organism. This strain does not form spores, which is characteristic of its metabolic adaptations and ecological niche. The lack of sporulation may suggest a reliance on stable environmental conditions for survival, as well as a potential sensitivity to extreme stressors that typically trigger sporulation in other bacterial species. The morphology of Undibacterium pigrum, being rod-shaped, may influence its motility and interaction with its environment, although specific motility traits are not provided. The aerobic nature of this bacterium indicates that it likely occupies niches where oxygen is readily available, such as surface waters or soils with good aeration. Given the traits of Undibacterium pigrum, further research could explore its role in biogeochemical cycles, particularly in oxygen-rich environments where it may contribute to nutrient cycling or organic matter degradation. The specific metabolic pathways and ecological interactions of this strain remain to be elucidated, but its aerobic nature positions it as a potentially important player in microbial communities that thrive in well-oxygenated habitats.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyOxalobacteraceae
GenusUndibacterium
SpeciesUndibacterium pigrum
StrainDSM 19792

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Undibacterium pigrum strain DSM 19792 Ga0244539_144, whole genome

Gene Summary

Adenine Count

1578919 bp

Thymine Count

1581259 bp

Guanine Count

1625272 bp

Cytosine Count

1620275 bp

Genome Length

6407125 bp

Protein-coding Genes

5713 genes

Non-Coding Genes

86 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
thioredoxin reductase (nadph)DFR42_1011000Not AvailablePositive1123034 - 112410438951.1
putative two-component system response regulatorDFR42_1011001Not AvailableNegative1124238 - 112536242113.8
pas domain s-box-containing proteinDFR42_1011002Not AvailableNegative1125434 - 1129726160066.0
poly(3-hydroxybutyrate) depolymeraseDFR42_1011003Not AvailablePositive1130245 - 113148046395.5
electron transport complex protein rnfbDFR42_1011004Not AvailablePositive1131627 - 113232525122.1
dna-(apurinic or apyrimidinic site) lyase /endonuclease iiiDFR42_1011005Not AvailablePositive1132322 - 113296924154.5
3-hydroxypropanoate dehydrogenaseDFR42_1011006Not AvailableNegative1133032 - 113361321223.3
uncharacterized protein duf1841DFR42_1011007Not AvailablePositive1133723 - 113415116482.5
beta-barrel assembly machine subunit bamcDFR42_1011008Not AvailableNegative1134238 - 113540742641.2
4-hydroxy-tetrahydrodipicolinate synthaseDFR42_1011009Not AvailableNegative1135485 - 113636931462.4

Displaying genes 1011 – 1020 of 5799 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.