Pontibacter korlensis str. X14-1T

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Hymenobacteraceae

Genus

Pontibacter

Description

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyHymenobacteraceae
GenusPontibacter
SpeciesPontibacter korlensis
StrainX14-1T

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pontibacter korlensis strain X14-1T chromosome, complete genome.

Gene Summary

Adenine Count

1437154 bp

Thymine Count

1439185 bp

Guanine Count

1292203 bp

Cytosine Count

1293995 bp

Genome Length

5462537 bp

Protein-coding Genes

4647 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sgnh/gdsl hydrolase family proteinPKOR_RS00355Not AvailableNegative82836 - 8361828919.8
daph/dapd/glmu-related proteinPKOR_RS00360Not AvailableNegative83791 - 8441122586.3
type ii toxin-antitoxin system pemk/mazf family toxinPKOR_RS00365Not AvailableNegative84549 - 8487212029.7
abrb/maze/spovt family dna-binding domain-containing proteinPKOR_RS00370Not AvailableNegative84863 - 851089468.4
dps family proteinPKOR_RS00375Not AvailableNegative85385 - 8586118144.3
hypothetical proteinPKOR_RS00380Not AvailableNegative86016 - 8732349930.2
duf6438 domain-containing proteinPKOR_RS00385Not AvailableNegative87456 - 8875749547.5
dabb family proteinPKOR_RS00390Not AvailableNegative88899 - 8931215759.0
gfo/idh/moca family proteinPKOR_RS00395Not AvailableNegative89390 - 9047539979.7
cupin domain-containing proteinPKOR_RS00400Not AvailablePositive90538 - 9105618969.3

Displaying genes 71 – 80 of 4709 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

226 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000047sophoroseC12H22O11Chemical structure of sophoroseNot available
Average342.297Da
Monoisotopic342.116211528Da
BASm0000122echinenoneC40H54OChemical structure of echinenoneNot available
Average550.871Da
Monoisotopic550.417466359Da
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000315acetylpyruvateC5H6O4Chemical structure of acetylpyruvateNot available
Average130.099Da
Monoisotopic130.0266087Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da

Displaying 1–10 of 226 metabolites

Health Effects

No health effects information available for this bacterium.