Enterobacter sp. 638

Gram-negativeRodMotileFacultative anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Enterobacter

Description

Enterobacter sp. 638 was isolated in association with poplar, Populus trichocarpa x deltoids, and represents a commonly found endophytic bacterium associated with this tree. Endophytes are bacteria that live within the tissue of a plant without substantively harming it. They can help promote plant growth in several ways, including helping the host overcome toxic effects of environmental pollution. Some Enterobacteriales can affect nodule formation by legumes, fix nitrogen and produce plant hormones. The family Enterobacteriacae includes free-living, commensal and pathogenic bacteria associated with host species ranging from plants to humans (adapted from http://genome.jgi-psf.org/finished_microbes/ent_6/ent_6.home.html). (EBI Integr8)

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusEnterobacter
SpeciesEnterobacter sp. 638
Strain638

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Enterobacter sp. 638
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultative anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Triticum aestivum, Solanum lycopersicum, Oryza sativa
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNo

Genome Summary

Enterobacter sp. 638

NC_009425.1

Gene Summary

Adenine Count

39268 bp

Thymine Count

38707 bp

Guanine Count

40657 bp

Cytosine Count

39117 bp

Genome Length

157749 bp

Protein-coding Genes

153 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
recombinase family proteinENT638_RS21605Not AvailableNegative33460 - 3404421476.9
tn3 family transposaseENT638_RS21610Not AvailablePositive34205 - 37189112843.0
helix-turn-helix domain-containing proteinENT638_RS23250Not AvailableNegative37119 - 3771222470.2
lysr family transcriptional regulatorENT638_RS21615Not AvailableNegative37754 - 3858130710.0
type ii toxin-antitoxin system antitoxin relbENT638_RS21620Not AvailablePositive38858 - 390979072.01
hypothetical proteinENT638_RS23255Not AvailablePositive39097 - 3938411131.7
hypothetical proteinENT638_RS24300Not AvailablePositive39386 - 396429504.12
tyrosine-type recombinase/integraseENT638_RS21630Not AvailableNegative39764 - 4075336527.3
hypothetical proteinENT638_RS21635Not AvailablePositive41959 - 421838551.4
hypothetical proteinENT638_RS21645Not AvailableNegative43065 - 4354117288.6

Displaying genes 31 – 40 of 153 in total

Metabolites

2007 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 2007 metabolites

Health Effects

No health effects information available for this bacterium.