Trichlorobacter lovleyi SZ

Gram-negativeRodNon-motileAnaerobe

Kingdom

Pseudomonadati

Phylum

Thermodesulfobacteriota

Class

Desulfuromonadia

Order

Geobacterales

Family

Geobacteraceae

Genus

Trichlorobacter

Description

Trichlorobacter lovleyi SZ is a Gram-negative, rod-shaped bacterium that exists as single cells and is classified as a chemolithotroph, utilizing inorganic compounds as its energy source. This microbe thrives optimally at a temperature of 35.0°C and is characterized as an anaerobe, indicating that it requires an oxygen-free environment for growth. The habitat of T. lovleyi SZ is diverse, suggesting its potential adaptability to various anaerobic environments. Its ability to metabolize inorganic substrates for energy may contribute to biogeochemical cycles, specifically in anaerobic conditions where it may play a role in the degradation of chlorinated compounds. This metabolic versatility could be particularly significant in natural and engineered ecosystems where pollutants are present, highlighting the potential for T. lovleyi SZ in bioremediation strategies. Understanding its specific interactions and roles within its habitats may provide insights into the broader ecological functions of anaerobic microbes in nutrient cycling and pollutant degradation.

Taxonomy

KingdomPseudomonadati
PhylumThermodesulfobacteriota
ClassDesulfuromonadia
OrderGeobacterales
FamilyGeobacteraceae
GenusTrichlorobacter
SpeciesTrichlorobacter lovleyi
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Trichlorobacter lovleyi SZ
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature35
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementSingles
SporulationNot Available
Energy sourceChemolithotroph
PathogenicityNot Available

Genome Summary

Trichlorobacter lovleyi SZ

Accession NumberNC_010814.1

Gene Summary

Adenine Count

885888 bp

Thymine Count

886097 bp

Guanine Count

1070871 bp

Cytosine Count

1074905 bp

Genome Length

3917761 bp

Protein-coding Genes

3604 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
precorrin-6y c5,15-methyltransferase (decarboxylating) subunit cbieGLOV_RS18030Not Available-1080 - 169722405.6
precorrin-6a reductaseGLOV_RS18035Not Available-1679 - 246428102.6
precorrin-3b c(17)-methyltransferaseGLOV_RS18040Not Available-2461 - 312923872.0
cobalt-precorrin 5a hydrolaseGLOV_RS18045Not Available-3171 - 395027753.1
precorrin-4 c(11)-methyltransferaseGLOV_RS18050Not Available-3947 - 470527148.6
cobalt-precorrin-5b (c(1))-methyltransferase cbidGLOV_RS18055Not Available-4702 - 577837613.4
precorrin-2 c(20)-methyltransferaseGLOV_RS18060Not Available-5775 - 651226832.6
sirohydrochlorin cobaltochelataseGLOV_RS18065Not Available-6512 - 729728217.1
precorrin-8x methylmutaseGLOV_RS18070Not Available-7294 - 798024338.7
cobyrinate a,c-diamide synthaseGLOV_RS18075Not Available-7955 - 939750998.1

Displaying genes 1 – 10 of 3751 in total

Pathways

23 pathways

Metabolites

88 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014058Myristic acidC14H28O2Chemical structure of Myristic acid544-63-8
Average228.3709Da
Monoisotopic228.20893014Da
BASm0014182Vaccenic acidC18H34O2Chemical structure of Vaccenic acidNULL
Average282.468Da
Monoisotopic282.255880335Da
BASm0014219Palmitoleic acidC16H30O2Chemical structure of Palmitoleic acidNULL
Average254.4082Da
Monoisotopic254.224580204Da
BASm0014222DiethanolamineC4H11NO2Chemical structure of DiethanolamineNULL
Average105.1356Da
Monoisotopic105.078978601Da

Displaying 1–10 of 88 metabolites